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SMAC_05480 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05480" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05480Hypothetical protein (2146 aa)    
Predicted Functional Partners:
SMAC_08745
Hypothetical protein (912 aa)
       
  0.915
SMAC_02402
Hypothetical protein (636 aa)
       
  0.880
SMAC_01032
Hypothetical protein (1182 aa)
     
  0.793
SMAC_05283
Hypothetical protein (194 aa)
       
  0.773
SMAC_06758
Hypothetical protein (1075 aa)
     
  0.771
SMAC_01723
Hypothetical protein (1148 aa)
     
  0.740
SMAC_03113
RFA1 protein (610 aa)
     
  0.705
SMAC_08850
Hypothetical protein (1024 aa)
       
  0.669
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
 
  0.660
SMAC_04066
Hypothetical protein (3888 aa)
     
  0.646
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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