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SMAC_08104 protein (Sordaria macrospora) - STRING interaction network
"SMAC_08104" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_08104Hypothetical protein (269 aa)    
Predicted Functional Partners:
SMAC_06245
Hypothetical protein (433 aa)
     
        0.691
SMAC_03957
Hypothetical protein (447 aa)
     
        0.690
RRP36
Hypothetical protein; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (333 aa)
     
        0.681
SMAC_07168
60S ribosome subunit biogenesis protein NOP53 (449 aa)
     
        0.674
SMAC_09079
Hypothetical protein (245 aa)
     
        0.644
SMAC_00691
Hypothetical protein (579 aa)
     
      0.581
SMAC_02864
Hypothetical protein (276 aa)
     
        0.550
SMAC_08272
Hypothetical protein (594 aa)
     
      0.530
SMAC_03876
Hypothetical protein (680 aa)
     
        0.491
SMAC_04244
Hypothetical protein (677 aa)
     
        0.485
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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