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SMAC_07168 protein (Sordaria macrospora) - STRING interaction network
"SMAC_07168" - 60S ribosome subunit biogenesis protein NOP53 in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0716860S ribosome subunit biogenesis protein NOP53 (449 aa)    
Predicted Functional Partners:
SMAC_06245
Hypothetical protein (433 aa)
     
 
  0.944
SPB1
Hypothetical protein; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (833 aa)
     
      0.928
SMAC_04437
66S preribosome component MAK16 (324 aa)
     
   
  0.924
SMAC_03957
Hypothetical protein (447 aa)
     
 
  0.904
SMAC_04244
Hypothetical protein (677 aa)
     
      0.904
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
 
  0.903
SMAC_08190
Hypothetical protein (723 aa)
     
 
  0.901
SMAC_01119
Hypothetical protein (731 aa)
     
      0.900
SMAC_01801
Hypothetical protein (1130 aa)
     
 
  0.900
SMAC_03876
Hypothetical protein (680 aa)
     
   
  0.899
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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