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SMAC_03749 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03749" - 60S ribosomal export protein NMD3 in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0374960S ribosomal export protein NMD3 (519 aa)    
Predicted Functional Partners:
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.969
SMAC_09163
Hypothetical protein (520 aa)
     
        0.966
SMAC_09901
Hypothetical protein (400 aa)
     
        0.966
SMAC_04423
Hypothetical protein (656 aa)
     
 
  0.962
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.952
SMAC_01860
Hypothetical protein (410 aa)
     
 
  0.939
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
   
  0.931
ERB1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (743 aa)
     
   
  0.924
SMAC_08190
Hypothetical protein (723 aa)
     
 
  0.906
SMAC_02640
Hypothetical protein (897 aa)
     
   
  0.900
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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