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SMAC_03880 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03880" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03880Hypothetical protein (168 aa)    
Predicted Functional Partners:
SMAC_07018
Hypothetical protein (528 aa)
   
  0.847
SMAC_06905
Hypothetical protein (378 aa)
   
  0.847
SMAC_07909
Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (235 aa)
   
  0.836
SMAC_11733
Hypothetical protein (86 aa)
   
  0.801
SMAC_04237
Hypothetical protein; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (203 aa)
   
  0.768
SMAC_06272
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (476 aa)
   
 
  0.692
SMAC_02366
Hypothetical protein; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
         
  0.660
SMAC_05191
Hypothetical protein (250 aa)
   
  0.626
SMAC_00907
Hypothetical protein (302 aa)
       
  0.623
SMAC_06529
Histidine kinase group protein (1570 aa)
       
  0.563
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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