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SMAC_03929 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03929" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03929Hypothetical protein (571 aa)    
Predicted Functional Partners:
SMAC_04413
Hypothetical protein (909 aa)
     
  0.984
SMAC_06237
Hypothetical protein; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1325 aa)
     
  0.979
SMAC_03802
Hypothetical protein (390 aa)
     
  0.975
SMAC_06627
Hypothetical protein (352 aa)
       
  0.903
SMAC_02247
Hypothetical protein (416 aa)
     
  0.847
SMAC_00218
Hypothetical protein (396 aa)
     
  0.814
SMAC_00418
Hypothetical protein (313 aa)
       
      0.749
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
 
  0.745
SMAC_03720
Hypothetical protein (1164 aa)
     
  0.744
SMAC_05411
Hypothetical protein (364 aa)
       
  0.717
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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