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SLX1 protein (Sordaria macrospora) - STRING interaction network
SLX1 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX1SLX1 protein; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA (392 aa)    
Predicted Functional Partners:
SMAC_04895
SGS1 protein (2276 aa)
     
  0.892
SMAC_05209
MEI9 protein (940 aa)
     
  0.827
SMAC_05189
MUS81 protein (630 aa)
     
  0.806
SMAC_03883
Hypothetical protein (416 aa)
     
  0.724
SMAC_06425
EXO1 protein (722 aa)
     
 
  0.706
SMAC_04277
RAD51 protein (353 aa)
     
 
  0.705
SMAC_00050
MRE11 protein (718 aa)
     
 
  0.699
SMAC_00184
RAD50 protein (1317 aa)
     
 
  0.698
SMAC_11630
Hypothetical protein (89 aa)
     
 
  0.690
SMAC_10163
Hypothetical protein (209 aa)
     
 
  0.690
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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