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SMAC_03984 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03984" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03984Hypothetical protein (478 aa)    
Predicted Functional Partners:
SMAC_05528
Ribosome biogenesis protein Nhp2 (249 aa)
   
  0.997
SMAC_08272
Hypothetical protein (594 aa)
   
 
  0.993
SMAC_02563
rRNA methyltransferase NOP1 (329 aa)
   
 
  0.991
SMAC_06245
Hypothetical protein (433 aa)
     
 
  0.991
SMAC_04961
Hypothetical protein (794 aa)
     
 
  0.988
SMAC_07471
Hypothetical protein (516 aa)
   
 
  0.985
SMAC_03058
Hypothetical protein (119 aa)
     
  0.984
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.977
SMAC_05113
Hypothetical protein (66 aa)
     
  0.973
SMAC_09134
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (323 aa)
     
 
  0.973
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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