STRINGSTRING
SMAC_04011 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04011" - Hypothetical protein in Sordaria macrospora
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04011Hypothetical protein (604 aa)    
Predicted Functional Partners:
SMAC_05184
Hypothetical protein (819 aa)
         
0.895
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
       
  0.869
SMAC_00082
Hypothetical protein (1825 aa)
     
  0.797
SMAC_06054
Hypothetical protein (918 aa)
   
  0.795
SMAC_05315
Hypothetical protein (934 aa)
   
  0.795
SMAC_06758
Hypothetical protein (1075 aa)
     
 
  0.739
SMAC_00927
Hypothetical protein (646 aa)
       
  0.735
SMAC_03598
Hypothetical protein (484 aa)
     
  0.721
FEN1
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (394 aa)
       
  0.711
SMAC_00164
Hypothetical protein; Single-stranded DNA-dependent ATP-dependent helicase (724 aa)
     
 
  0.684
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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