STRINGSTRING
SMAC_04013 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04013" - SMC1 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04013SMC1 protein (1263 aa)    
Predicted Functional Partners:
SMAC_01999
SMC3 protein (1199 aa)
     
0.998
SMAC_03947
SCC3 protein (1222 aa)
     
  0.998
scc1
MCD1/ SCC1/Rad21 protein (658 aa)
     
  0.997
SMAC_02911
REC8 protein (763 aa)
     
  0.996
SMAC_02224
ESP1 protein (2157 aa)
     
  0.988
SMAC_04859
Hypothetical protein (1022 aa)
     
  0.963
csm1
SMC4/CSM1 protein (1644 aa)
     
 
0.960
SMAC_01734
SCC2 protein (1939 aa)
     
  0.955
bimD
PDS5/BimD/ Spo76 protein (1596 aa)
     
  0.952
SMAC_01010
TOP2 protein (1915 aa)
     
 
  0.919
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (8%) [HD]