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SMAC_04034 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04034" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04034Hypothetical protein (551 aa)    
Predicted Functional Partners:
SMAC_09127
OS2 protein (357 aa)
       
  0.973
SMAC_03492
MAK2 protein (352 aa)
       
  0.872
SMAC_05504
MAK1 protein (471 aa)
       
  0.872
SMAC_07111
Transcriptional repressor TUP1 (602 aa)
       
  0.833
SMAC_08303
Hypothetical protein (664 aa)
       
 
  0.636
SMAC_00946
Hypothetical protein (1586 aa)
       
 
  0.606
SMAC_06757
Hypothetical protein (1365 aa)
       
 
  0.606
SMAC_07655
Phytochrome 2 (928 aa)
       
 
  0.512
SMAC_08323
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
       
    0.507
SMAC_02364
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.496
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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