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SMAC_04056 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04056" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04056Hypothetical protein (648 aa)    
Predicted Functional Partners:
SMAC_05788
Hypothetical protein (985 aa)
     
 
  0.922
SMAC_06522
Hypothetical protein (969 aa)
     
 
  0.918
SMAC_07056
Hypothetical protein (779 aa)
     
      0.916
SMAC_00852
Hypothetical protein (844 aa)
     
 
  0.771
PRT1
Hypothetical protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (725 aa)
     
 
  0.665
SMAC_03077
Hypothetical protein (791 aa)
   
 
0.643
TIF35
Hypothetical protein (297 aa)
     
 
  0.636
SMAC_00366
Hypothetical protein (309 aa)
       
 
  0.634
SMAC_02477
Hypothetical protein (249 aa)
       
 
  0.634
NIP1
Hypothetical protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (862 aa)
     
      0.623
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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