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SMAC_02854 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02854" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02854Hypothetical protein (327 aa)    
Predicted Functional Partners:
SMAC_04262
Hypothetical protein (287 aa)
     
  0.996
SMAC_00700
Hypothetical protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (333 aa)
     
  0.995
SMAC_02295
Hypothetical protein (565 aa)
     
  0.966
SMAC_03231
Hypothetical protein (1032 aa)
     
  0.952
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
      0.920
SMAC_08103
Hypothetical protein (1280 aa)
       
      0.891
SMAC_06127
Hypothetical protein (601 aa)
       
      0.891
SMAC_01010
TOP2 protein (1915 aa)
       
 
  0.889
SMAC_12109
Hypothetical protein (297 aa)
     
      0.887
SMAC_04445
Hypothetical protein (699 aa)
     
 
  0.866
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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