STRINGSTRING
SMAC_01814 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01814" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01814Hypothetical protein (689 aa)    
Predicted Functional Partners:
SMAC_03111
Hypothetical protein (401 aa)
 
 
  0.988
SMAC_07082
Hypothetical protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (368 aa)
 
  0.979
SMAC_02388
Hypothetical protein (318 aa)
 
  0.974
SMAC_07383
Hypothetical protein (523 aa)
   
  0.967
SMAC_03112
Hypothetical protein (383 aa)
   
  0.967
SMAC_02611
Hypothetical protein (376 aa)
   
  0.967
SMAC_05453
Hypothetical protein (621 aa)
   
 
  0.910
SMAC_04927
Hypothetical protein (527 aa)
       
  0.910
SMAC_01215
Hypothetical protein (379 aa)
     
 
  0.903
SMAC_05316
Hypothetical protein (330 aa)
     
 
  0.900
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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