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SMAC_01860 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01860" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01860Hypothetical protein (410 aa)    
Predicted Functional Partners:
SMAC_02008
mRNA turnover protein MRT4 (255 aa)
   
 
  0.943
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.941
SMAC_03749
60S ribosomal export protein NMD3 (519 aa)
     
 
  0.939
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.937
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
 
  0.931
SMAC_05814
Hypothetical protein (624 aa)
     
 
  0.927
SMAC_08096
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (183 aa)
     
 
  0.926
SMAC_08190
Hypothetical protein (723 aa)
     
 
  0.926
SMAC_00258
Ribosome biogenesis protein NSA2 (259 aa)
     
 
  0.916
SMAC_01475
Hypothetical protein (518 aa)
     
 
  0.911
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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