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PIF1 protein (Sordaria macrospora) - STRING interaction network
"PIF1" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIF1Hypothetical protein; DNA-dependent ATPase and 5’-3’ DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability (932 aa)    
Predicted Functional Partners:
SMAC_07054
Hypothetical protein (1235 aa)
     
 
  0.857
SMAC_04277
RAD51 protein (353 aa)
   
 
  0.835
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
   
 
  0.785
SMAC_07845
RAD52 protein (631 aa)
       
 
  0.756
SMAC_03385
Hypothetical protein (1750 aa)
     
 
  0.736
SMAC_02366
Hypothetical protein; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
     
 
  0.642
SMAC_07548
Hypothetical protein (1071 aa)
     
  0.636
SMAC_04828
Hypothetical protein (1210 aa)
       
  0.603
SMAC_04167
Hypothetical protein (527 aa)
     
 
  0.595
SMAC_05189
MUS81 protein (630 aa)
     
 
  0.594
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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