STRINGSTRING
SMAC_01956 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01956" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01956Hypothetical protein (556 aa)    
Predicted Functional Partners:
SMAC_09140
Hypothetical protein (789 aa)
     
  0.992
SMAC_03402
Hypothetical protein (2098 aa)
     
  0.986
SMAC_03875
Hypothetical protein (356 aa)
     
  0.974
SMAC_06280
Hypothetical protein (662 aa)
       
  0.965
SMAC_12586
Hypothetical protein (482 aa)
     
  0.944
SMAC_03445
Hypothetical protein; Binds the poly(A) tail of mRNA (754 aa)
     
  0.854
SMAC_00657
Hypothetical protein (1805 aa)
     
  0.834
SMAC_01638
CR1 protein (2312 aa)
       
  0.784
SMAC_07641
Hypothetical protein (493 aa)
       
  0.776
SMAC_00136
Hypothetical protein (853 aa)
     
  0.774
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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