STRINGSTRING
SMAC_01959 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01959" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01959Hypothetical protein (227 aa)    
Predicted Functional Partners:
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
   
 
  0.959
SMAC_05557
60S ribosomal protein L5 (307 aa)
     
 
  0.944
SMAC_04274
60S ribosomal protein L9 (193 aa)
   
      0.943
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.942
SMAC_05962
S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein (744 aa)
     
 
  0.935
SMAC_02108
60S ribosomal protein L7 (248 aa)
     
 
  0.933
SMAC_04198
60S ribosomal protein L3 (392 aa)
     
 
  0.933
SMAC_02879
60S ribosomal protein L24 (156 aa)
     
 
  0.931
SMAC_01910
Hypothetical protein (315 aa)
   
 
  0.925
SMAC_00094
Hypothetical protein (1083 aa)
     
 
  0.913
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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