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SMAC_01976 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01976" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01976Hypothetical protein (442 aa)    
Predicted Functional Partners:
SMAC_02286
Hypothetical protein (316 aa)
         
  0.904
SMAC_06532
Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1428 aa)
       
      0.577
SMAC_06454
Hypothetical protein (238 aa)
     
  0.562
SMAC_02951
Hypothetical protein (473 aa)
     
    0.556
SMAC_07561
Hypothetical protein (349 aa)
     
    0.553
SMAC_02616
Hypothetical protein (883 aa)
     
    0.549
SMAC_06339
Hypothetical protein (777 aa)
     
    0.549
SMAC_00208
Hypothetical protein (90 aa)
       
    0.542
SMAC_02644
Hypothetical protein (193 aa)
     
  0.540
SMAC_02337
Hypothetical protein (574 aa)
       
    0.512
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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