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SMAC_09048 protein (Sordaria macrospora) - STRING interaction network
"SMAC_09048" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_09048Hypothetical protein (1781 aa)    
Predicted Functional Partners:
SMAC_01943
Hypothetical protein (183 aa)
       
  0.930
SMAC_03809
Hypothetical protein (1639 aa)
     
0.903
SMAC_02938
Hypothetical protein (881 aa)
     
 
  0.854
SMAC_01609
Hypothetical protein (185 aa)
       
  0.813
SMAC_06922
Hypothetical protein (184 aa)
       
  0.807
SMAC_06207
Hypothetical protein (214 aa)
       
  0.776
SMAC_06469
Hypothetical protein (1293 aa)
     
 
  0.770
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
  0.743
SMAC_02216
CDC42 protein (196 aa)
       
  0.708
SMAC_06239
RHO1 protein (195 aa)
       
  0.706
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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