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SMAC_08888 protein (Sordaria macrospora) - STRING interaction network
"SMAC_08888" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_08888Hypothetical protein; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits (4983 aa)    
Predicted Functional Partners:
SMAC_05250
Hypothetical protein (377 aa)
     
 
  0.926
SMAC_01475
Hypothetical protein (518 aa)
     
 
  0.913
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
 
  0.904
SMAC_08190
Hypothetical protein (723 aa)
     
 
  0.866
SMAC_05814
Hypothetical protein (624 aa)
     
 
  0.832
SMAC_02360
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1701 aa)
     
        0.832
SMAC_04919
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1239 aa)
     
 
  0.809
SMAC_00089
Hypothetical protein (1776 aa)
     
   
  0.802
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.797
CLU1
Hypothetical protein; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria (1199 aa)
     
      0.784
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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