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SMAC_08890 protein (Sordaria macrospora) - STRING interaction network
"SMAC_08890" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_08890Hypothetical protein (342 aa)    
Predicted Functional Partners:
SMAC_06647
Hypothetical protein (1139 aa)
       
  0.663
SMAC_02916
Hypothetical protein (548 aa)
       
  0.645
SMAC_01106
Hypothetical protein (428 aa)
       
  0.581
SMAC_04502
Hypothetical protein (586 aa)
       
  0.580
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
 
    0.559
SMAC_02534
Hypothetical protein (406 aa)
         
  0.496
SMAC_05776
Hypothetical protein (365 aa)
     
 
    0.478
SMAC_03142
Hypothetical protein (427 aa)
         
  0.476
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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