STRINGSTRING
SMAC_05506 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05506" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05506Hypothetical protein (1238 aa)    
Predicted Functional Partners:
SMAC_08473
Hypothetical protein (98 aa)
       
  0.970
SMAC_05584
Hypothetical protein (157 aa)
     
  0.968
SMAC_01010
TOP2 protein (1915 aa)
     
  0.852
SMAC_05013
Hypothetical protein (150 aa)
       
  0.793
SMAC_01081
Hypothetical protein (208 aa)
       
  0.793
SMAC_05726
Hypothetical protein (163 aa)
       
  0.793
SMAC_08740
Hypothetical protein (147 aa)
       
  0.793
SMAC_04780
UBC11 protein (124 aa)
       
  0.771
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
       
 
  0.744
SMAC_03355
Hypothetical protein (156 aa)
     
  0.718
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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