STRINGSTRING
SMAC_05515 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05515" - 60S ribosomal protein L30 in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0551560S ribosomal protein L30 (109 aa)    
Predicted Functional Partners:
SMAC_10240
Hypothetical protein (180 aa)
   
  0.999
SMAC_07803
60S ribosomal protein L26 (122 aa)
   
  0.997
SMAC_08848
60S ribosomal protein L2 (254 aa)
   
  0.997
SMAC_08178
40S ribosomal protein S5 (213 aa)
   
  0.997
SMAC_04917
40S ribosomal protein S16 (142 aa)
   
  0.996
SMAC_01319
60S ribosomal protein L14 (142 aa)
   
  0.996
SMAC_04364
60S ribosomal protein L6 (223 aa)
   
  0.996
SMAC_05514
60S ribosomal protein L10 (221 aa)
     
  0.996
SMAC_06911
40S ribosomal protein S24 (136 aa)
     
  0.996
SMAC_02606
60S ribosomal protein L4 (361 aa)
     
  0.996
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (8%) [HD]