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SMAC_05520 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05520" - 60S acidic ribosomal protein P1 in Sordaria macrospora
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0552060S acidic ribosomal protein P1 (109 aa)    
Predicted Functional Partners:
SMAC_00256
60S acidic ribosomal protein P2 (110 aa)
     
  0.999
SMAC_10240
Hypothetical protein (180 aa)
     
    0.998
SMAC_00356
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (312 aa)
   
  0.998
SMAC_05515
60S ribosomal protein L30 (109 aa)
     
  0.987
SMAC_06705
60S ribosomal protein L1 (217 aa)
   
  0.986
SMAC_02458
60S ribosomal protein L15 (203 aa)
     
  0.986
SMAC_04365
60S ribosomal protein L35 (127 aa)
     
  0.986
SMAC_06672
40S ribosomal protein S7 (202 aa)
     
  0.985
SMAC_07803
60S ribosomal protein L26 (122 aa)
     
  0.985
SMAC_04909
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability (87 aa)
     
  0.984
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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