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SMAC_05533 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05533" - Hypothetical protein in Sordaria macrospora
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
SMAC_05533Hypothetical protein (709 aa)    
Predicted Functional Partners:
PAN3
Hypothetical protein; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by poly(A)-binding protein PAB1, which is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequent 5’-3’ exonucleolytic degradation by XRN1 [...] (525 aa)
     
  0.887
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.815
SMAC_10327
Hypothetical protein (125 aa)
     
  0.815
SMAC_10326
Hypothetical protein (162 aa)
     
  0.815
SMAC_10614
Hypothetical protein (195 aa)
     
  0.768
SMAC_10967
Hypothetical protein (119 aa)
     
  0.768
SMAC_11878
Hypothetical protein (78 aa)
     
  0.768
SMAC_10275
Hypothetical protein (120 aa)
       
  0.743
SMAC_06206
Ribosome biogenesis protein BRX1 (323 aa)
     
        0.691
SMAC_08044
Hypothetical protein (206 aa)
     
      0.673
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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