STRINGSTRING
SMAC_05566 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05566" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05566Hypothetical protein (1493 aa)    
Predicted Functional Partners:
SMAC_07054
Hypothetical protein (1235 aa)
     
 
  0.640
SMAC_01310
Hypothetical protein (2293 aa)
       
 
  0.587
SMAC_04266
Hypothetical protein (1193 aa)
       
 
  0.585
SMAC_01615
Hypothetical protein (566 aa)
       
 
  0.578
SMAC_01766
Hypothetical protein (874 aa)
     
 
  0.573
SMAC_06685
Hypothetical protein (2835 aa)
       
 
  0.572
SMAC_08638
Hypothetical protein (518 aa)
       
 
  0.547
SMAC_06855
CSM3 protein (370 aa)
       
 
  0.543
SMAC_00634
Hypothetical protein (701 aa)
       
 
  0.539
SMAC_02185
Hypothetical protein (658 aa)
       
 
  0.539
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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