STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05580Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (438 aa)    
Predicted Functional Partners:
SMAC_02108
WGS project CABT00000000 data, contig 2.18.
  
 
 0.884
SMAC_04365
WGS project CABT00000000 data, contig 2.19.
  
 
 0.877
SMAC_05557
WGS project CABT00000000 data, contig 2.26.
  
 
 0.874
SMAC_07803
WGS project CABT00000000 data, contig 2.41.
  
   0.863
SMAC_07091
WGS project CABT00000000 data, contig 2.39.
  
 
 0.842
SMAC_01921
WGS project CABT00000000 data, contig 2.5; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.824
SMAC_01392
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.795
SMAC_00248
WGS project CABT00000000 data, contig 2.1; Belongs to the universal ribosomal protein uS19 family.
  
   0.772
SMAC_05865
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.726
SMAC_09953
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.726
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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