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SMAC_06052 protein (Sordaria macrospora) - STRING interaction network
"SMAC_06052" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_06052Hypothetical protein (432 aa)    
Predicted Functional Partners:
SMAC_06073
ubiquitin-40S ribosomal protein S31 fusion protein (154 aa)
       
      0.560
SMAC_08841
Hypothetical protein (427 aa)
     
   
  0.519
SMAC_06206
Ribosome biogenesis protein BRX1 (323 aa)
     
        0.499
NOP7
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (661 aa)
     
        0.477
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (488 aa)
     
        0.474
UTP25
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (742 aa)
     
   
  0.452
RRP36
Hypothetical protein; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (333 aa)
     
   
  0.441
TSR3
Hypothetical protein; Ribosome biogenesis protein required for processing 35S pre-rRNA at site D (426 aa)
     
   
  0.438
SMAC_02640
Hypothetical protein (897 aa)
     
        0.429
SMAC_01737
Hypothetical protein (153 aa)
     
        0.403
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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