STRINGSTRING
SMAC_03007 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03007" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03007Hypothetical protein (1004 aa)    
Predicted Functional Partners:
SMAC_06758
Hypothetical protein (1075 aa)
     
0.985
SMAC_06760
Hypothetical protein (352 aa)
     
  0.977
SMAC_03989
Hypothetical protein (357 aa)
     
  0.976
SMAC_04344
Hypothetical protein (387 aa)
     
  0.963
SMAC_08123
Hypothetical protein (389 aa)
     
0.949
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
 
  0.935
SMAC_00450
RAD17 protein (948 aa)
     
  0.877
SMAC_02758
Hypothetical protein (854 aa)
     
 
  0.858
SMAC_02144
Hypothetical protein (1482 aa)
     
 
  0.857
SMAC_07880
Hypothetical protein (1340 aa)
     
 
  0.825
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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