STRINGSTRING
SMAC_03127 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03127" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03127Hypothetical protein (525 aa)    
Predicted Functional Partners:
SMAC_06000
Hypothetical protein (439 aa)
     
      0.979
SMAC_12109
Hypothetical protein (297 aa)
     
 
  0.965
SMAC_03234
Hypothetical protein (225 aa)
     
 
  0.945
SMAC_02645
Hypothetical protein (572 aa)
     
      0.940
SMAC_02361
Hypothetical protein (489 aa)
     
      0.938
SMAC_04169
Hypothetical protein (614 aa)
     
      0.932
SMAC_03936
Hypothetical protein (501 aa)
     
      0.932
SMAC_04300
Hypothetical protein (694 aa)
     
      0.931
SMAC_07056
Hypothetical protein (779 aa)
     
      0.931
SMAC_06216
Hypothetical protein (652 aa)
     
      0.931
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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