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SMAC_03138 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03138" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03138Hypothetical protein (323 aa)    
Predicted Functional Partners:
SMAC_08609
Hypothetical protein (1105 aa)
     
  0.979
SMAC_00438
Hypothetical protein (547 aa)
     
    0.940
SMAC_06224
Hypothetical protein (544 aa)
     
  0.931
SMAC_01331
Hypothetical protein (878 aa)
     
  0.922
SMAC_09134
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (323 aa)
     
 
  0.902
SMAC_02696
Hypothetical protein (183 aa)
     
 
  0.871
SMAC_00342
Hypothetical protein (914 aa)
     
  0.870
SMAC_00898
Hypothetical protein (480 aa)
     
 
  0.861
SMAC_00198
Hypothetical protein (777 aa)
     
 
  0.853
SMAC_03096
Hypothetical protein (921 aa)
     
  0.839
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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