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SMAC_03142 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03142" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03142Hypothetical protein (427 aa)    
Predicted Functional Partners:
SMAC_05776
Hypothetical protein (365 aa)
     
  0.992
SMAC_02534
Hypothetical protein (406 aa)
     
  0.985
SMAC_02358
Hypothetical protein (796 aa)
     
  0.979
SMAC_06332
Hypothetical protein; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (303 aa)
       
  0.965
SMAC_04012
Hypothetical protein (352 aa)
     
  0.921
SMAC_12613
Hypothetical protein (420 aa)
     
  0.911
SMAC_06647
Hypothetical protein (1139 aa)
     
  0.895
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
  0.889
SMAC_03477
Hypothetical protein (328 aa)
       
  0.883
SMAC_01971
Hypothetical protein (782 aa)
       
  0.867
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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