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SMAC_03221 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03221" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03221Hypothetical protein (763 aa)    
Predicted Functional Partners:
SMAC_04575
Synaptojanin-like protein (1328 aa)
     
  0.774
SMAC_03538
Hypothetical protein (1576 aa)
     
  0.706
SMAC_07641
Hypothetical protein (493 aa)
       
  0.701
SMAC_06922
Hypothetical protein (184 aa)
       
  0.686
SMAC_01609
Hypothetical protein (185 aa)
       
  0.684
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
  0.666
SMAC_07025
Hypothetical protein (1486 aa)
     
  0.633
SMAC_09048
Hypothetical protein (1781 aa)
     
  0.633
SMAC_03535
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1229 aa)
     
    0.628
SMAC_03013
Hypothetical protein (898 aa)
     
  0.597
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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