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SMAC_07018 protein (Sordaria macrospora) - STRING interaction network
"SMAC_07018" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_07018Hypothetical protein (528 aa)    
Predicted Functional Partners:
SMAC_03939
Hypothetical protein (498 aa)
   
  0.964
SMAC_04237
Hypothetical protein; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (203 aa)
   
 
  0.898
SMAC_03880
Hypothetical protein (168 aa)
   
  0.847
SMAC_00907
Hypothetical protein (302 aa)
   
  0.835
SMAC_00078
Hypothetical protein (227 aa)
   
   
  0.652
SMAC_07909
Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (235 aa)
     
 
  0.634
SMAC_02870
Hypothetical protein (870 aa)
         
  0.613
SMAC_05191
Hypothetical protein (250 aa)
   
 
  0.594
SMAC_11733
Hypothetical protein (86 aa)
     
 
  0.555
SMAC_03789
Hypothetical protein (274 aa)
   
        0.515
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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