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SMAC_07024 protein (Sordaria macrospora) - STRING interaction network
"SMAC_07024" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_07024Hypothetical protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (675 aa)    
Predicted Functional Partners:
SMAC_03780
Hypothetical protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (624 aa)
     
  0.990
SMAC_07227
Hypothetical protein (354 aa)
     
  0.977
SMAC_05070
Hypothetical protein (512 aa)
     
  0.930
SMAC_02797
Hypothetical protein (548 aa)
       
      0.872
SPB1
Hypothetical protein; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (833 aa)
       
      0.857
SMAC_00921
Hypothetical protein (377 aa)
     
      0.762
SMAC_04806
Hypothetical protein (934 aa)
       
      0.672
SMAC_06481
Hypothetical protein (678 aa)
       
      0.632
SMAC_05528
Ribosome biogenesis protein Nhp2 (249 aa)
         
  0.631
SMAC_02396
90S preribosome component RRP12 (1264 aa)
       
      0.626
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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