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SMAC_00874 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00874" - SMC2 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00874SMC2 protein (1179 aa)    
Predicted Functional Partners:
csm1
SMC4/CSM1 protein (1644 aa)
     
0.998
ycs5
YCG1/YCS5 protein (1286 aa)
     
  0.997
SMAC_00613
Hypothetical protein (916 aa)
     
  0.993
SMAC_08639
Ycs4 protein; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1250 aa)
     
  0.993
SMAC_06324
TID3 protein (743 aa)
     
  0.968
SMAC_00205
Kinesin-5 (1209 aa)
     
  0.936
SMAC_01010
TOP2 protein (1915 aa)
     
 
  0.920
scc1
MCD1/ SCC1/Rad21 protein (658 aa)
     
  0.904
SMAC_02911
REC8 protein (763 aa)
     
  0.899
SMAC_00378
Hypothetical protein (1252 aa)
     
  0.877
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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