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SMAC_00917 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00917" - Mitochondrial 54S ribosomal protein YmL3 in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00917Mitochondrial 54S ribosomal protein YmL3 (441 aa)    
Predicted Functional Partners:
SMAC_04418
Mitochondrial 54S ribosomal protein YmL7/YmL5 (352 aa)
     
 
  0.862
SMAC_02212
Hypothetical protein (258 aa)
   
 
  0.853
SMAC_07045
Mitochondrial 54S ribosomal protein YmL6 (349 aa)
     
 
  0.840
SMAC_06065
Hypothetical protein (433 aa)
     
 
  0.839
SMAC_08141
Hypothetical protein (266 aa)
     
 
  0.824
SMAC_02710
Mitochondrial 54S ribosomal protein YmL8 (193 aa)
     
 
  0.820
SMAC_01702
Hypothetical protein (267 aa)
     
 
  0.819
SMAC_05129
Mitochondrial 54S ribosomal protein MRPL1 (304 aa)
     
 
  0.808
SMAC_02075
Mitochondrial 54S ribosomal protein YmL10/YmL18 (312 aa)
     
 
  0.805
SMAC_06759
Mitochondrial 54S ribosomal protein YmL47 (250 aa)
     
 
  0.804
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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