STRINGSTRING
SMAC_01002 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01002" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01002Hypothetical protein (624 aa)    
Predicted Functional Partners:
SMAC_05405
Hypothetical protein (641 aa)
     
 
  0.831
SMAC_00050
MRE11 protein (718 aa)
     
 
  0.785
SMAC_04614
TOP1 protein (912 aa)
       
 
  0.759
SMAC_00927
Hypothetical protein (646 aa)
     
 
  0.623
SMAC_10519
Hypothetical protein (223 aa)
     
 
  0.606
SMAC_03598
Hypothetical protein (484 aa)
     
 
  0.602
SMAC_00164
Hypothetical protein; Single-stranded DNA-dependent ATP-dependent helicase (724 aa)
       
  0.573
SMAC_05189
MUS81 protein (630 aa)
     
 
  0.563
SMAC_06991
Hypothetical protein (607 aa)
     
 
    0.545
SMAC_00330
Hypothetical protein (1048 aa)
     
 
    0.530
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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