STRINGSTRING
SMAC_01010 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01010" - TOP2 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01010TOP2 protein (1915 aa)    
Predicted Functional Partners:
SMAC_04614
TOP1 protein (912 aa)
     
 
  0.983
SMAC_10294
Hypothetical protein (230 aa)
     
 
  0.983
SMAC_08639
Ycs4 protein; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1250 aa)
     
   
  0.975
SMAC_03231
Hypothetical protein (1032 aa)
     
  0.965
SMAC_02224
ESP1 protein (2157 aa)
     
 
  0.948
SMAC_04895
SGS1 protein (2276 aa)
   
  0.946
SMAC_04096
Hypothetical protein (463 aa)
   
  0.946
SMAC_02295
Hypothetical protein (565 aa)
     
 
  0.941
SMAC_06137
Hypothetical protein (388 aa)
     
 
  0.935
SMAC_01844
Hypothetical protein (689 aa)
     
    0.929
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (6%) [HD]