STRINGSTRING
CLP1 protein (Sordaria macrospora) - STRING interaction network
"CLP1" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLP1Hypothetical protein; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (487 aa)    
Predicted Functional Partners:
SMAC_01625
Hypothetical protein (321 aa)
     
  0.964
SMAC_08606
Hypothetical protein (1112 aa)
     
  0.938
SMAC_02403
Hypothetical protein (753 aa)
       
  0.928
SMAC_04589
Hypothetical protein (321 aa)
     
  0.927
SMAC_04980
Hypothetical protein (1486 aa)
     
  0.920
SMAC_00122
Hypothetical protein (635 aa)
     
  0.902
SMAC_07216
Hypothetical protein (857 aa)
     
  0.902
SMAC_04231
Hypothetical protein (692 aa)
     
  0.900
SMAC_04407
Hypothetical protein (833 aa)
     
    0.856
SMAC_05921
Hypothetical protein (1003 aa)
     
  0.847
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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