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SMAC_01085 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01085" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01085Hypothetical protein (591 aa)    
Predicted Functional Partners:
SMAC_03749
60S ribosomal export protein NMD3 (519 aa)
     
 
  0.888
SMAC_04423
Hypothetical protein (656 aa)
     
 
  0.865
SMAC_02797
Hypothetical protein (548 aa)
     
 
  0.787
SMAC_04437
66S preribosome component MAK16 (324 aa)
     
        0.768
SMAC_01860
Hypothetical protein (410 aa)
     
 
  0.701
SMAC_03957
Hypothetical protein (447 aa)
     
      0.656
SMAC_00258
Ribosome biogenesis protein NSA2 (259 aa)
     
        0.655
SMAC_08096
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (183 aa)
     
        0.648
SMAC_04897
Hypothetical protein (340 aa)
     
        0.640
SMAC_08320
Hypothetical protein (457 aa)
     
 
  0.582
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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