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SMAC_02295 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02295" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02295Hypothetical protein (565 aa)    
Predicted Functional Partners:
SMAC_03231
Hypothetical protein (1032 aa)
     
  0.991
SMAC_08103
Hypothetical protein (1280 aa)
     
  0.972
SMAC_06127
Hypothetical protein (601 aa)
     
  0.971
SMAC_02854
Hypothetical protein (327 aa)
     
  0.966
SMAC_04581
Hypothetical protein (530 aa)
     
  0.959
SMAC_02208
Hypothetical protein (493 aa)
     
  0.958
SMAC_04262
Hypothetical protein (287 aa)
     
  0.951
SMAC_08323
Hypothetical protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
  0.947
SMAC_00700
Hypothetical protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (333 aa)
     
  0.945
SMAC_01010
TOP2 protein (1915 aa)
     
 
  0.941
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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