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SMAC_02319 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02319" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02319Hypothetical protein (122 aa)    
Predicted Functional Partners:
SMAC_12613
Hypothetical protein (420 aa)
     
  0.978
SMAC_04607
Hypothetical protein (1268 aa)
     
  0.961
SMAC_02534
Hypothetical protein (406 aa)
     
  0.927
SMAC_00238
Hypothetical protein (1708 aa)
     
  0.909
SMAC_06969
Hypothetical protein (363 aa)
     
  0.903
SMAC_05776
Hypothetical protein (365 aa)
       
  0.897
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
  0.889
SMAC_06647
Hypothetical protein (1139 aa)
     
  0.872
SMAC_02654
Hypothetical protein (363 aa)
     
  0.859
SMAC_05291
Hypothetical protein (233 aa)
     
  0.844
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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