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SMAC_02403 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02403" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02403Hypothetical protein (753 aa)    
Predicted Functional Partners:
CLP1
Hypothetical protein; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (487 aa)
       
  0.928
SMAC_08606
Hypothetical protein (1112 aa)
     
  0.910
SMAC_01625
Hypothetical protein (321 aa)
     
  0.868
SMAC_05921
Hypothetical protein (1003 aa)
     
  0.844
SMAC_09051
Hypothetical protein (438 aa)
       
  0.814
SMAC_00430
Hypothetical protein (444 aa)
     
  0.803
SMAC_07683
Hypothetical protein (655 aa)
     
  0.783
SMAC_01968
Hypothetical protein (264 aa)
       
  0.771
SMAC_08479
Hypothetical protein (608 aa)
     
  0.769
SMAC_04231
Hypothetical protein (692 aa)
     
  0.740
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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