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SMAC_02437 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02437" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02437Hypothetical protein (715 aa)    
Predicted Functional Partners:
SMAC_04647
Hypothetical protein (872 aa)
   
0.920
SMAC_05350
Hypothetical protein (614 aa)
     
  0.819
SMAC_05585
Hypothetical protein (332 aa)
     
  0.779
SMAC_06532
Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1428 aa)
     
      0.756
SMAC_04662
Hypothetical protein (833 aa)
       
      0.749
SMAC_04277
RAD51 protein (353 aa)
       
      0.734
SMAC_09269
Hypothetical protein (894 aa)
   
 
  0.718
SMAC_00490
Hypothetical protein (732 aa)
     
   
  0.624
SMAC_03438
Hypothetical protein (234 aa)
     
 
  0.623
SMAC_07794
Hypothetical protein (320 aa)
     
 
  0.616
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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