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SMAC_12592 protein (Sordaria macrospora) - STRING interaction network
"SMAC_12592" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_12592Hypothetical protein (670 aa)    
Predicted Functional Partners:
SMAC_00248
40S ribosomal protein S15 (152 aa)
       
      0.749
SMAC_01898
60S ribosomal protein L32 (131 aa)
       
      0.749
SMAC_06501
60S ribosomal protein L29 (65 aa)
       
      0.749
SMAC_02457
Hypothetical protein (213 aa)
 
            0.671
SMAC_01956
Hypothetical protein (556 aa)
       
 
  0.623
SMAC_01613
60S ribosomal protein L31 (122 aa)
       
 
  0.599
SMAC_12601
60S ribosomal protein L13 (218 aa)
       
      0.592
SMAC_01386
60S ribosomal protein L42 (106 aa)
       
      0.592
SMAC_01319
60S ribosomal protein L14 (142 aa)
       
      0.592
SMAC_02562
60S ribosomal protein L17 (212 aa)
       
      0.592
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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