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SMAC_04248 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04248" - MSH5 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_04248MSH5 protein (923 aa)    
Predicted Functional Partners:
SMAC_04137
MLH3 protein (966 aa)
   
  0.906
SMAC_00910
MLH1 protein (752 aa)
   
  0.905
SMAC_01858
Hypothetical protein (1251 aa)
   
  0.893
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.809
SMAC_10327
Hypothetical protein (125 aa)
     
  0.809
SMAC_10326
Hypothetical protein (162 aa)
     
  0.809
SMAC_04895
SGS1 protein (2276 aa)
   
  0.759
SMAC_06425
EXO1 protein (722 aa)
   
  0.754
SMAC_03113
RFA1 protein (610 aa)
     
  0.735
SMAC_07802
Hypothetical protein (903 aa)
   
  0.733
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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