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SMAC_04274 protein (Sordaria macrospora) - STRING interaction network
"SMAC_04274" - 60S ribosomal protein L9 in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0427460S ribosomal protein L9 (193 aa)    
Predicted Functional Partners:
SMAC_10240
Hypothetical protein (180 aa)
   
  0.999
SMAC_04198
60S ribosomal protein L3 (392 aa)
 
  0.998
SMAC_04007
Hypothetical protein (106 aa)
   
  0.997
SMAC_00356
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (312 aa)
   
  0.997
SMAC_08178
40S ribosomal protein S5 (213 aa)
   
  0.997
SMAC_05897
40S ribosomal protein S20 (117 aa)
   
  0.997
SMAC_06705
60S ribosomal protein L1 (217 aa)
   
  0.997
SMAC_01921
40S ribosomal protein S3 (262 aa)
   
  0.997
SMAC_02606
60S ribosomal protein L4 (361 aa)
   
  0.997
SMAC_01898
60S ribosomal protein L32 (131 aa)
   
  0.996
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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