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SMAC_03519 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03519" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03519Hypothetical protein (115 aa)    
Predicted Functional Partners:
SMAC_02008
mRNA turnover protein MRT4 (255 aa)
     
 
  0.875
SMAC_00258
Ribosome biogenesis protein NSA2 (259 aa)
     
 
  0.868
SMAC_06245
Hypothetical protein (433 aa)
     
      0.840
SMAC_05814
Hypothetical protein (624 aa)
     
 
  0.810
SMAC_01475
Hypothetical protein (518 aa)
     
 
  0.790
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.779
SMAC_03769
Hypothetical protein (1357 aa)
       
      0.763
SMAC_05528
Ribosome biogenesis protein Nhp2 (249 aa)
     
 
  0.733
SMAC_03089
60S ribosomal protein L38 (80 aa)
     
      0.732
SMAC_08096
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (183 aa)
     
        0.709
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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